STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS50459.1Histidine kinase. (578 aa)    
Predicted Functional Partners:
SDS50419.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.949
SDS50512.1
Signal transduction histidine kinase.
 
     0.873
SDS56062.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.858
SDS45748.1
Regulatory protein, luxR family.
  
  0.822
SDS50551.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.818
SDS30341.1
Regulatory protein, luxR family.
 
 0.662
SDS50595.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.654
SDR68512.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
 0.553
SDR87445.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
 0.553
SDR87943.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
 0.553
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.