STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS54813.1Signal transduction histidine kinase. (316 aa)    
Predicted Functional Partners:
SDS54858.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.981
SDR86207.1
Response regulator receiver domain-containing protein.
  
  0.921
SDR78246.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
0.919
SDS37833.1
Two-component system, OmpR family, response regulator MtrA.
  
  0.919
SDS31639.1
Two-component system, OmpR family, response regulator RegX3.
  
  0.918
SDR86885.1
Two-component system, OmpR family, response regulator.
 
  0.917
SDS32590.1
Two-component system, OmpR family, response regulator.
 
  0.917
SDR66609.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.915
SDS18944.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.901
SDS31213.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.849
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.