STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS58367.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
SDS58421.1
Homeodomain-like domain-containing protein; Manually curated.
      0.939
SDS58472.1
Primase C terminal 1 (PriCT-1).
       0.738
SDS58522.1
Protein of unknown function.
       0.737
SDS58254.1
Chromosome partitioning protein, ParB family.
       0.629
SDS58323.1
Hypothetical protein.
       0.629
SDS58211.1
Hypothetical protein.
       0.598
SDS58121.1
Hypothetical protein.
       0.575
SDS58162.1
Peptidase family M23.
       0.557
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.