STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMH79794.1ABC-type transport system involved in organic solvent resistance, auxiliary component. (197 aa)    
Predicted Functional Partners:
EMH79795.1
Surface lipoprotein.
 
 
 
 0.971
EMH80242.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
    
  0.608
EMH79932.1
ADP-heptose:LPS heptosyltransferase.
  
     0.569
EMH79796.1
Negative regulator of beta-lactamase expression.
       0.545
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
    0.543
EMH80697.1
Putative periplasmic or secreted lipoprotein.
  
    0.478
EMH80699.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.463
EMH80307.1
Putative permease; Overlaps another CDS with the same product name.
  
     0.443
EMH80197.1
Beta-barrel assembly machine subunit BamA.
  
     0.420
Your Current Organism:
alpha proteobacterium HIMB114
NCBI taxonomy Id: 684719
Other names: a. proteobacterium HIMB114
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