STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMH79966.1Tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (329 aa)    
Predicted Functional Partners:
EMH79968.1
TRAP transporter, DctM subunit.
    0.957
EMH79967.1
TRAP-type C4-dicarboxylate transport system, small permease protein.
 
    0.904
EMH80603.1
TRAP transporter, DctM subunit.
 
    0.874
EMH79944.1
TRAP transporter, DctM subunit.
 
    0.842
EMH80797.1
TRAP-type mannitol/chloroaromatic compound transport system, large permease protein.
     0.656
EMH79970.1
Putative acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
  
    0.572
EMH79969.1
enoyl-CoA hydratase/carnithine racemase.
       0.571
EMH79965.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
       0.568
EMH79964.1
FAD/FMN-dependent dehydrogenase.
 
     0.498
EMH80604.1
TRAP-type C4-dicarboxylate transport system, small permease protein.
  
    0.476
Your Current Organism:
alpha proteobacterium HIMB114
NCBI taxonomy Id: 684719
Other names: a. proteobacterium HIMB114
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.