STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMH80361.1Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (888 aa)    
Predicted Functional Partners:
EMH79964.1
FAD/FMN-dependent dehydrogenase.
    
 0.889
EMH80696.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.888
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 0.809
glyS
glycine--tRNA ligase beta chain.
  
    0.802
glyQ
glycine--tRNA ligase alpha chain.
       0.796
EMH80364.1
ClpP class periplasmic serine protease.
       0.791
EMH80483.1
Histidinol-phosphate phosphatase family protein.
     
 0.786
EMH79694.1
Pyruvate dehydrogenase E1 component, homodimeric type.
     
 0.738
EMH80789.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase.
     
 0.725
EMH79721.1
Glucose-6-phosphate isomerase.
    
 0.705
Your Current Organism:
alpha proteobacterium HIMB114
NCBI taxonomy Id: 684719
Other names: a. proteobacterium HIMB114
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