STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMH80487.1O-Antigen ligase. (414 aa)    
Predicted Functional Partners:
EMH80244.1
Tetratricopeptide repeat protein.
  
 
 0.905
EMH80483.1
Histidinol-phosphate phosphatase family protein.
    
  0.866
EMH80492.1
Glycosyltransferase.
  
 
  0.832
EMH80493.1
Hypothetical protein.
  
 
  0.831
EMH80486.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
  
  
 0.808
EMH80489.1
Glycosyltransferase.
  
  
 0.788
EMH80484.1
Phosphoheptose isomerase.
       0.782
EMH80488.1
Phosphoheptose isomerase.
       0.782
EMH80480.1
Methyltransferase, FkbM family.
       0.775
EMH80482.1
Transaldolase.
       0.775
Your Current Organism:
alpha proteobacterium HIMB114
NCBI taxonomy Id: 684719
Other names: a. proteobacterium HIMB114
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