STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMH80947.1ABC-type spermidine/putrescine transport system, ABC protein; Belongs to the ABC transporter superfamily. (346 aa)    
Predicted Functional Partners:
EMH80946.1
ABC-type Fe3+ transport system, permease protein.
 
 0.985
EMH80945.1
ABC-type Fe3+ transport system, periplasmic component.
 
 
 0.964
EMH80118.1
Amino acid ABC transporter membrane protein, PAAT family.
 
    0.859
EMH80948.1
Putative phosphatase.
 
     0.805
speE
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
  
  
 0.505
EMH80205.1
ABC-type antimicrobial peptide transport system, ABC protein.
  
 
 
0.469
EMH80941.1
ABC-type antimicrobial peptide transport system, ABC protein.
  
 
 
0.428
EMH80395.1
ABC-type multidrug transport system, ABC protein.
  
  
 
0.400
Your Current Organism:
alpha proteobacterium HIMB114
NCBI taxonomy Id: 684719
Other names: a. proteobacterium HIMB114
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.