STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_1069Prepilin peptidase. (308 aa)    
Predicted Functional Partners:
pilC
Type IV pilus assembly protein PilC.
 
  
 0.916
DC74_1071
Type IV pilus assembly protein PilB.
 
 
 0.912
DC74_1070
Type IV pilus assembly protein PilA.
 
  
 0.906
DC74_1076
Type IV pilus assembly protein PilT.
 
   
 0.862
DC74_3096
Putative integral membrane protein.
 
  
 0.804
DC74_1064
General secretion pathway protein G.
 
  
 0.800
DC74_5737
DNA processing smf-family protein.
  
  
 0.677
DC74_5187
Hypothetical protein; Belongs to the peptidase A24 family.
  
     0.639
DC74_5832
Two-component system sensor kinase.
   
 
 0.636
DC74_3097
Hypothetical protein.
   
  
 0.624
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.