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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_1083Solute-binding protein. (535 aa)    
Predicted Functional Partners:
DC74_1081
ABC transporter transmembrane protein.
 
 
 0.979
DC74_1082
Oligopeptide ABC transporter transmembrane protein.
 
 
 0.979
DC74_1080
Nucleotide-binding ABC transporter.
 
  
 0.950
DC74_1088
Hypothetical protein.
 
     0.920
DC74_1084
Methyltransferase.
 
     0.895
DC74_1089
Bifunctional protein (ligase and argininosuccinate lyase).
 
     0.844
DC74_1086
Muconate cycloisomerase.
 
     0.817
DC74_6894
Putative ABC transporter permease protein.
 
 
 0.775
DC74_6895
Hypothetical protein.
 
 
 0.768
DC74_7864
Binding-protein-dependent transporter inner membrane component.
 
 
 0.761
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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