Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1330 | DC74_1331 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | ArsR family transcriptional regulator. | 0.450 |
DC74_1330 | DC74_20 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Hypothetical protein. | 0.717 |
DC74_1330 | DC74_2192 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Putative UreA transporter. | 0.447 |
DC74_1330 | DC74_3095 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | N-hydroxyarylamine O-acetyltransferase; Belongs to the arylamine N-acetyltransferase family. | 0.441 |
DC74_1330 | DC74_4000 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Hypothetical protein. | 0.572 |
DC74_1330 | DC74_4441 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Lysine biosynthesis enzyme LysX. | 0.707 |
DC74_1330 | DC74_594 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Putative calmodulin-like protein. | 0.483 |
DC74_1330 | DC74_6879 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Hypothetical protein. | 0.674 |
DC74_1330 | DC74_7706 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Ribosyldihydronicotinamide dehydrogenase. | 0.432 |
DC74_1330 | DC74_7768 | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | Glycine amidinotransferase. | 0.611 |
DC74_1331 | DC74_1330 | ArsR family transcriptional regulator. | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | 0.450 |
DC74_20 | DC74_1330 | Hypothetical protein. | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | 0.717 |
DC74_20 | DC74_2192 | Hypothetical protein. | Putative UreA transporter. | 0.674 |
DC74_20 | DC74_4000 | Hypothetical protein. | Hypothetical protein. | 0.742 |
DC74_20 | DC74_594 | Hypothetical protein. | Putative calmodulin-like protein. | 0.688 |
DC74_20 | DC74_6879 | Hypothetical protein. | Hypothetical protein. | 0.738 |
DC74_20 | DC74_7706 | Hypothetical protein. | Ribosyldihydronicotinamide dehydrogenase. | 0.572 |
DC74_20 | DC74_7768 | Hypothetical protein. | Glycine amidinotransferase. | 0.724 |
DC74_2192 | DC74_1330 | Putative UreA transporter. | Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family. | 0.447 |
DC74_2192 | DC74_20 | Putative UreA transporter. | Hypothetical protein. | 0.674 |
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