Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_142 | DC74_143 | IS298, transposase OrfA. | Putative transposase. | 0.954 |
DC74_142 | DC74_4429 | IS298, transposase OrfA. | Hypothetical protein. | 0.756 |
DC74_142 | DC74_6172 | IS298, transposase OrfA. | Hypothetical protein. | 0.746 |
DC74_142 | DC74_652 | IS298, transposase OrfA. | Hypothetical protein. | 0.756 |
DC74_142 | DC74_8072 | IS298, transposase OrfA. | Hypothetical protein. | 0.756 |
DC74_142 | DC74_832 | IS298, transposase OrfA. | Hypothetical protein. | 0.759 |
DC74_143 | DC74_142 | Putative transposase. | IS298, transposase OrfA. | 0.954 |
DC74_143 | DC74_4429 | Putative transposase. | Hypothetical protein. | 0.660 |
DC74_143 | DC74_6172 | Putative transposase. | Hypothetical protein. | 0.618 |
DC74_143 | DC74_652 | Putative transposase. | Hypothetical protein. | 0.660 |
DC74_143 | DC74_7378 | Putative transposase. | Hypothetical protein. | 0.489 |
DC74_143 | DC74_7402 | Putative transposase. | IS298, transposase OrfA. | 0.807 |
DC74_143 | DC74_8072 | Putative transposase. | Hypothetical protein. | 0.660 |
DC74_143 | DC74_829 | Putative transposase. | IS298, transposase OrfA. | 0.807 |
DC74_143 | DC74_832 | Putative transposase. | Hypothetical protein. | 0.663 |
DC74_143 | DC74_906 | Putative transposase. | IS298, transposase OrfA. | 0.807 |
DC74_4429 | DC74_142 | Hypothetical protein. | IS298, transposase OrfA. | 0.756 |
DC74_4429 | DC74_143 | Hypothetical protein. | Putative transposase. | 0.660 |
DC74_4429 | DC74_7378 | Hypothetical protein. | Hypothetical protein. | 0.723 |
DC74_4429 | DC74_7402 | Hypothetical protein. | IS298, transposase OrfA. | 0.756 |
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