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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_1584Putative trypsin-like protease. (238 aa)    
Predicted Functional Partners:
DC74_740
Peptidase M14 carboxypeptidase A.
  
 
 0.775
DC74_5906
Putative trypsin-like protease.
  
     0.762
DC74_1583
Hypothetical protein.
       0.509
DC74_1585
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
     0.500
DC74_4053
Hypothetical protein.
  
     0.490
DC74_1758
Hypothetical protein.
  
 
  0.450
DC74_5627
Hypothetical protein.
  
     0.450
DC74_2242
Integral membrane protein.
  
     0.449
DC74_2801
Ferredoxin.
  
     0.449
DC74_6121
Methyl-accepting chemotaxis sensory transducer.
  
     0.445
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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