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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcaC_23-phenylpropionate dioxygenase ferredoxin subunit. (109 aa)    
Predicted Functional Partners:
DC74_2398
Ferredoxin subunit of phenylpropionate dioxygenase.
  
  
 
0.912
DC74_7012
NADPH-ferredoxin reductase.
     
 0.905
hcaC_1
3-phenylpropionate dioxygenase ferredoxin subunit.
  
  
 
0.902
hcaD_4
Ferredoxin reductase.
 
 
 0.713
DC74_2005
uroporphyrin-III methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.699
DC74_3019
nirB.
 
 
 0.662
DC74_3963
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
  
 0.635
DC74_6859
Ferredoxin reductase.
  
 
 0.633
DC74_3020
Nitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.604
DC74_1698
IclR family transcriptional regulator.
  
    0.567
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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