Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DC74_1596 | DC74_2197 | DC74_1596 | DC74_2197 | DNA-binding transcriptional repressor MngR. | GntR family transcriptional regulator. | 0.673 |
DC74_1596 | DC74_7200 | DC74_1596 | DC74_7200 | DNA-binding transcriptional repressor MngR. | GntR family transcriptional regulator. | 0.642 |
DC74_1596 | phnF | DC74_1596 | DC74_3650 | DNA-binding transcriptional repressor MngR. | GntR family transcriptional regulator. | 0.685 |
DC74_2195 | DC74_2197 | DC74_2195 | DC74_2197 | TetR family transcriptional regulator. | GntR family transcriptional regulator. | 0.738 |
DC74_2195 | hmgA | DC74_2195 | DC74_2196 | TetR family transcriptional regulator. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.766 |
DC74_2197 | DC74_1596 | DC74_2197 | DC74_1596 | GntR family transcriptional regulator. | DNA-binding transcriptional repressor MngR. | 0.673 |
DC74_2197 | DC74_2195 | DC74_2197 | DC74_2195 | GntR family transcriptional regulator. | TetR family transcriptional regulator. | 0.738 |
DC74_2197 | DC74_2308 | DC74_2197 | DC74_2308 | GntR family transcriptional regulator. | Hypothetical protein. | 0.698 |
DC74_2197 | DC74_4357 | DC74_2197 | DC74_4357 | GntR family transcriptional regulator. | Bifunctional sensor kinase/response regulator. | 0.743 |
DC74_2197 | DC74_4459 | DC74_2197 | DC74_4459 | GntR family transcriptional regulator. | Hypothetical protein. | 0.705 |
DC74_2197 | DC74_449 | DC74_2197 | DC74_449 | GntR family transcriptional regulator. | GntR family regulatory protein. | 0.760 |
DC74_2197 | DC74_5243 | DC74_2197 | DC74_5243 | GntR family transcriptional regulator. | GntR family regulator. | 0.676 |
DC74_2197 | DC74_7200 | DC74_2197 | DC74_7200 | GntR family transcriptional regulator. | GntR family transcriptional regulator. | 0.772 |
DC74_2197 | hmgA | DC74_2197 | DC74_2196 | GntR family transcriptional regulator. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.830 |
DC74_2197 | phnF | DC74_2197 | DC74_3650 | GntR family transcriptional regulator. | GntR family transcriptional regulator. | 0.765 |
DC74_2308 | DC74_2197 | DC74_2308 | DC74_2197 | Hypothetical protein. | GntR family transcriptional regulator. | 0.698 |
DC74_2308 | DC74_4357 | DC74_2308 | DC74_4357 | Hypothetical protein. | Bifunctional sensor kinase/response regulator. | 0.698 |
DC74_4357 | DC74_2197 | DC74_4357 | DC74_2197 | Bifunctional sensor kinase/response regulator. | GntR family transcriptional regulator. | 0.743 |
DC74_4357 | DC74_2308 | DC74_4357 | DC74_2308 | Bifunctional sensor kinase/response regulator. | Hypothetical protein. | 0.698 |
DC74_4459 | DC74_2197 | DC74_4459 | DC74_2197 | Hypothetical protein. | GntR family transcriptional regulator. | 0.705 |
page 1 of 2