Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DC74_2540ABC transporter ATP-binding protein. (323 aa)    
Predicted Functional Partners:
DC74_2539
Putative ABC transporter permease protein.
 
 
 0.945
DC74_2538
Hypothetical protein.
 
     0.789
DC74_2735
Putative ABC transporter permease protein.
 
 
 0.773
DC74_2541
Hypothetical protein.
       0.752
DC74_5139
Putative ABC transporter permease protein.
 
 
 0.713
DC74_5964
ABC transporter.
 
 
 0.677
DC74_5945
Putative ABC transporter ATP-binding protein.
 
  
  0.659
DC74_2092
Glycine betaine ABC transport system permease protein.
     
  0.631
DC74_1506
Putative ABC transporter ATPase and permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.627
DC74_4037
Hypothetical protein.
  
 
 0.571
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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