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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_2636Pyridoxalphosphate-dependent protein. (458 aa)    
Predicted Functional Partners:
DC74_2395
Putative nitrogen fixation protein NifU-related protein.
 
 
 0.949
DC74_2397
ABC transporter ATP-binding protein.
 
  
 0.931
DC74_2400
Iron-regulated ABC-type transporter.
 
 
 0.907
DC74_2399
Iron-regulated ABC-type transporter.
 
 
 0.902
trpD1
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.714
qcrB
Cytochrome subunit beta.
     
 0.682
qcrA
Ubiquinol-cytochrome c reductase iron-sulfur 'Rieske' subunit.
       0.662
DC74_2640
Cytochrome c heme-binding subunit.
       0.662
ctaE
Cytochrome c oxidase subunit III.
  
    0.644
DC74_2642
Putative two-component system response regulator.
  
    0.618
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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