Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DC74_1505 | DC74_2794 | DC74_1505 | DC74_2794 | Hypothetical protein. | FMN-dependent monooxygenase. | 0.757 |
DC74_1505 | DC74_4279 | DC74_1505 | DC74_4279 | Hypothetical protein. | Hypothetical protein. | 0.755 |
DC74_1505 | DC74_7213 | DC74_1505 | DC74_7213 | Hypothetical protein. | Rif11-like protein. | 0.548 |
DC74_1505 | DC74_7579 | DC74_1505 | DC74_7579 | Hypothetical protein. | Putative monooxygenase. | 0.430 |
DC74_1505 | cofD | DC74_1505 | DC74_3465 | Hypothetical protein. | 2-phopspho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.788 |
DC74_1505 | fbiB | DC74_1505 | DC74_3466 | Hypothetical protein. | F420-0:gamma-glutamyl ligase; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0. | 0.767 |
DC74_2792 | DC74_2793 | DC74_2792 | DC74_2793 | Hypothetical protein. | Putative integral membrane protein. | 0.774 |
DC74_2792 | DC74_2794 | DC74_2792 | DC74_2794 | Hypothetical protein. | FMN-dependent monooxygenase. | 0.673 |
DC74_2793 | DC74_2792 | DC74_2793 | DC74_2792 | Putative integral membrane protein. | Hypothetical protein. | 0.774 |
DC74_2793 | DC74_2794 | DC74_2793 | DC74_2794 | Putative integral membrane protein. | FMN-dependent monooxygenase. | 0.749 |
DC74_2794 | DC74_1505 | DC74_2794 | DC74_1505 | FMN-dependent monooxygenase. | Hypothetical protein. | 0.757 |
DC74_2794 | DC74_2792 | DC74_2794 | DC74_2792 | FMN-dependent monooxygenase. | Hypothetical protein. | 0.673 |
DC74_2794 | DC74_2793 | DC74_2794 | DC74_2793 | FMN-dependent monooxygenase. | Putative integral membrane protein. | 0.749 |
DC74_2794 | DC74_3734 | DC74_2794 | DC74_3734 | FMN-dependent monooxygenase. | Hypothetical protein. | 0.767 |
DC74_2794 | DC74_4279 | DC74_2794 | DC74_4279 | FMN-dependent monooxygenase. | Hypothetical protein. | 0.730 |
DC74_2794 | DC74_6302 | DC74_2794 | DC74_6302 | FMN-dependent monooxygenase. | Hypothetical protein. | 0.621 |
DC74_2794 | DC74_7213 | DC74_2794 | DC74_7213 | FMN-dependent monooxygenase. | Rif11-like protein. | 0.722 |
DC74_2794 | DC74_7579 | DC74_2794 | DC74_7579 | FMN-dependent monooxygenase. | Putative monooxygenase. | 0.716 |
DC74_2794 | cofD | DC74_2794 | DC74_3465 | FMN-dependent monooxygenase. | 2-phopspho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.775 |
DC74_2794 | fbiB | DC74_2794 | DC74_3466 | FMN-dependent monooxygenase. | F420-0:gamma-glutamyl ligase; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0. | 0.777 |
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