STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nixAHigh-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (399 aa)    
Predicted Functional Partners:
plcC_3
Phospholipase C.
  
     0.537
DC74_885
Natural resistance-associated macrophage protein.
  
   
 0.481
DC74_7032
Natural resistance-associated macrophage protein.
  
   
 0.480
DC74_894
Manganese transport transmembrane protein.
  
   
 0.468
DC74_7507
Protein of unknown function DUF347.
  
     0.444
DC74_1049
EmrB/QacA family drug resistance transporter.
      
 0.434
DC74_1232
EmrB/QacA family drug resistance transporter.
      
 0.434
DC74_2828
Major facilitator superfamily permease.
      
 0.434
DC74_2839
Hypothetical protein.
       0.417
DC74_2840
Alpha/beta hydrolase fold protein.
       0.417
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.