Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_2998 | DC74_3019 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | nirB. | 0.998 |
DC74_2998 | DC74_3020 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.991 |
DC74_2998 | DC74_3021 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrite reductase (NAD(P)H) small subunit. | 0.991 |
DC74_2998 | DC74_3081 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Dioxygenase. | 0.900 |
DC74_2998 | DC74_3397 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrate extrusion protein. | 0.980 |
DC74_2998 | DC74_7708 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Dioxygenase. | 0.900 |
DC74_2998 | DC74_7955 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrate reductase gamma chain. | 0.913 |
DC74_2998 | DC74_7957 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrate reductase subunit beta. | 0.909 |
DC74_2998 | DC74_7958 | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.913 |
DC74_3019 | DC74_2998 | nirB. | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.998 |
DC74_3019 | DC74_3020 | nirB. | Nitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.990 |
DC74_3019 | DC74_3021 | nirB. | Nitrite reductase (NAD(P)H) small subunit. | 0.998 |
DC74_3019 | DC74_3022 | nirB. | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.736 |
DC74_3019 | DC74_3081 | nirB. | Dioxygenase. | 0.900 |
DC74_3019 | DC74_3397 | nirB. | Nitrate extrusion protein. | 0.976 |
DC74_3019 | DC74_7708 | nirB. | Dioxygenase. | 0.900 |
DC74_3019 | DC74_7955 | nirB. | Nitrate reductase gamma chain. | 0.925 |
DC74_3019 | DC74_7957 | nirB. | Nitrate reductase subunit beta. | 0.936 |
DC74_3019 | DC74_7958 | nirB. | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.959 |
DC74_3020 | DC74_2998 | Nitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.991 |
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