Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DC74_3044 | DC74_3045 | DC74_3044 | DC74_3045 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Manganese/zinc transport system ABC transporter ATP-binding protein. | 0.999 |
DC74_3044 | DC74_3046 | DC74_3044 | DC74_3046 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Putative metal transport ABC transporter permease protein. | 0.999 |
DC74_3044 | DC74_3047 | DC74_3044 | DC74_3047 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein. | 0.491 |
DC74_3044 | DC74_3048 | DC74_3044 | DC74_3048 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Metal uptake regulator; Belongs to the Fur family. | 0.848 |
DC74_3044 | DC74_4411 | DC74_3044 | DC74_4411 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Cobalamin biosynthesis protein. | 0.741 |
DC74_3044 | DC74_5832 | DC74_3044 | DC74_5832 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Two-component system sensor kinase. | 0.532 |
DC74_3044 | glyQS | DC74_3044 | DC74_3043 | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.760 |
DC74_3045 | DC74_3044 | DC74_3045 | DC74_3044 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.999 |
DC74_3045 | DC74_3046 | DC74_3045 | DC74_3046 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Putative metal transport ABC transporter permease protein. | 0.999 |
DC74_3045 | DC74_3047 | DC74_3045 | DC74_3047 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Hypothetical protein. | 0.746 |
DC74_3045 | DC74_3048 | DC74_3045 | DC74_3048 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Metal uptake regulator; Belongs to the Fur family. | 0.869 |
DC74_3045 | DC74_4411 | DC74_3045 | DC74_4411 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Cobalamin biosynthesis protein. | 0.540 |
DC74_3045 | DC74_5832 | DC74_3045 | DC74_5832 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Two-component system sensor kinase. | 0.505 |
DC74_3045 | DC74_6701 | DC74_3045 | DC74_6701 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Hypothetical protein. | 0.585 |
DC74_3045 | DC74_6938 | DC74_3045 | DC74_6938 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Putative ABC transporter ATPase and permease component. | 0.520 |
DC74_3045 | dnaJ2 | DC74_3045 | DC74_3082 | Manganese/zinc transport system ABC transporter ATP-binding protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.536 |
DC74_3045 | glyQS | DC74_3045 | DC74_3043 | Manganese/zinc transport system ABC transporter ATP-binding protein. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.693 |
DC74_3046 | DC74_3044 | DC74_3046 | DC74_3044 | Putative metal transport ABC transporter permease protein. | Putative metal transport ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.999 |
DC74_3046 | DC74_3045 | DC74_3046 | DC74_3045 | Putative metal transport ABC transporter permease protein. | Manganese/zinc transport system ABC transporter ATP-binding protein. | 0.999 |
DC74_3046 | DC74_3047 | DC74_3046 | DC74_3047 | Putative metal transport ABC transporter permease protein. | Hypothetical protein. | 0.773 |
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