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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_3074Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (435 aa)    
Predicted Functional Partners:
DC74_2380
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.984
DC74_2194
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
     
 0.901
DC74_2802
Oxidoreductase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
DC74_4549
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
DC74_5090
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
     
 0.901
DC74_3075
Acid phosphatase (class B).
       0.583
DC74_3070
Putative carbohydrate kinase.
     
 0.569
DC74_2172
Putative phosphotransferase.
       0.557
DC74_2173
acyl-CoA dehydrogenase.
       0.557
DC74_3067
Hypothetical protein.
       0.557
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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