Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DC74_2882 | DC74_3085 | DC74_2882 | DC74_3085 | Hypothetical protein. | Hypothetical protein. | 0.637 |
DC74_2882 | DC74_3377 | DC74_2882 | DC74_3377 | Hypothetical protein. | Protein involving differentiation. | 0.606 |
DC74_2882 | DC74_4205 | DC74_2882 | DC74_4205 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0232 family. | 0.652 |
DC74_2882 | DC74_6066 | DC74_2882 | DC74_6066 | Hypothetical protein. | Hypothetical protein. | 0.752 |
DC74_3080 | DC74_3081 | DC74_3080 | DC74_3081 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Dioxygenase. | 0.875 |
DC74_3080 | DC74_3084 | DC74_3080 | DC74_3084 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Metallo-beta-lactamase. | 0.672 |
DC74_3080 | DC74_3085 | DC74_3080 | DC74_3085 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Hypothetical protein. | 0.681 |
DC74_3080 | dnaJ2 | DC74_3080 | DC74_3082 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.882 |
DC74_3080 | hrcA | DC74_3080 | DC74_3083 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Heat shock genes heat-inducible transcriptional repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.832 |
DC74_3081 | DC74_3080 | DC74_3081 | DC74_3080 | Dioxygenase. | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.875 |
DC74_3081 | DC74_3084 | DC74_3081 | DC74_3084 | Dioxygenase. | Metallo-beta-lactamase. | 0.674 |
DC74_3081 | DC74_3085 | DC74_3081 | DC74_3085 | Dioxygenase. | Hypothetical protein. | 0.639 |
DC74_3081 | dnaJ2 | DC74_3081 | DC74_3082 | Dioxygenase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.791 |
DC74_3081 | hrcA | DC74_3081 | DC74_3083 | Dioxygenase. | Heat shock genes heat-inducible transcriptional repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.786 |
DC74_3084 | DC74_3080 | DC74_3084 | DC74_3080 | Metallo-beta-lactamase. | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.672 |
DC74_3084 | DC74_3081 | DC74_3084 | DC74_3081 | Metallo-beta-lactamase. | Dioxygenase. | 0.674 |
DC74_3084 | DC74_3085 | DC74_3084 | DC74_3085 | Metallo-beta-lactamase. | Hypothetical protein. | 0.760 |
DC74_3084 | dnaJ2 | DC74_3084 | DC74_3082 | Metallo-beta-lactamase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.718 |
DC74_3084 | hrcA | DC74_3084 | DC74_3083 | Metallo-beta-lactamase. | Heat shock genes heat-inducible transcriptional repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.746 |
DC74_3085 | DC74_2882 | DC74_3085 | DC74_2882 | Hypothetical protein. | Hypothetical protein. | 0.637 |
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