Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DC74_3285Sensory box/GGDEF family protein. (632 aa)    
Predicted Functional Partners:
DC74_5832
Two-component system sensor kinase.
  
 
 0.994
DC74_4351
Two-component system sensor kinase.
  
 
 0.978
DC74_5640
Integral membrane phosphodiesterase.
 
 
0.978
DC74_4771
Hypothetical protein.
 
 
0.835
DC74_6334
Response regulator receiver protein.
  
 
 0.824
DC74_5118
Secreted protein.
 
 
0.777
DC74_3284
Hypothetical protein.
       0.715
DC74_5831
Magnesium or manganese-dependent protein phosphatase.
  
 
 0.577
whiG
RNA polymerase sigma factor WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.572
DC74_5833
Hypothetical protein.
  
 
 0.557
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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