STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_3313Oxidoreductase. (373 aa)    
Predicted Functional Partners:
DC74_3211
IolD protein; Belongs to the TPP enzyme family.
 
  
 0.673
DC74_3212
IolB protein.
  
  
 0.624
DC74_3311
GntR family transcriptional regulator.
  
    0.572
DC74_3312
Hypothetical protein.
     
 0.565
DC74_3215
IolE protein.
 
  
 0.564
DC74_3310
Putative oxidoreductase.
  
    0.560
DC74_3304
nagD; Belongs to the HAD-like hydrolase superfamily.
     
 0.558
DC74_3309
Putative hydrolase.
       0.554
lysS-2
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.474
DC74_3227
Hypothetical protein.
  
  
 0.470
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.