Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_2713 | DC74_3413 | Putative maltose ABC transporter permease protein. | Putative sugar ABC transporter solute-binding protein. | 0.449 |
DC74_2713 | DC74_3414 | Putative maltose ABC transporter permease protein. | Putative ABC transporter permease protein. | 0.865 |
DC74_2713 | DC74_4748 | Putative maltose ABC transporter permease protein. | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.995 |
DC74_2740 | DC74_3413 | Integral membrane transporter. | Putative sugar ABC transporter solute-binding protein. | 0.556 |
DC74_2740 | DC74_3414 | Integral membrane transporter. | Putative ABC transporter permease protein. | 0.865 |
DC74_2740 | DC74_4748 | Integral membrane transporter. | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.952 |
DC74_3026 | DC74_3413 | Binding-protein-dependent transport systems inner membrane component. | Putative sugar ABC transporter solute-binding protein. | 0.496 |
DC74_3026 | DC74_3414 | Binding-protein-dependent transport systems inner membrane component. | Putative ABC transporter permease protein. | 0.868 |
DC74_3026 | DC74_4748 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.954 |
DC74_3175 | DC74_3413 | Hypothetical protein. | Putative sugar ABC transporter solute-binding protein. | 0.496 |
DC74_3175 | DC74_3414 | Hypothetical protein. | Putative ABC transporter permease protein. | 0.869 |
DC74_3175 | DC74_4748 | Hypothetical protein. | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.953 |
DC74_3413 | DC74_2713 | Putative sugar ABC transporter solute-binding protein. | Putative maltose ABC transporter permease protein. | 0.449 |
DC74_3413 | DC74_2740 | Putative sugar ABC transporter solute-binding protein. | Integral membrane transporter. | 0.556 |
DC74_3413 | DC74_3026 | Putative sugar ABC transporter solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.496 |
DC74_3413 | DC74_3175 | Putative sugar ABC transporter solute-binding protein. | Hypothetical protein. | 0.496 |
DC74_3413 | DC74_3414 | Putative sugar ABC transporter solute-binding protein. | Putative ABC transporter permease protein. | 0.993 |
DC74_3413 | DC74_3415 | Putative sugar ABC transporter solute-binding protein. | Putative ABC transporter permease protein. | 0.996 |
DC74_3413 | DC74_4748 | Putative sugar ABC transporter solute-binding protein. | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.940 |
DC74_3413 | DC74_5385 | Putative sugar ABC transporter solute-binding protein. | Hypothetical protein. | 0.449 |
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