Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DC74_3577Putative beta-galactosidase. (684 aa)    
Predicted Functional Partners:
galA
Alpha-galactosidase.
    
 0.929
DC74_2742
Solute-binding lipoprotein.
 
  
 0.849
DC74_4077
Glycoside hydrolase family protein.
  
 0.766
DC74_6539
Neuraminidase.
  
 0.741
DC74_6011
Nuclear protein SET.
    
 0.682
DC74_1112
SMP-30/gluconolaconase/LRE domain protein.
    
  0.673
DC74_4164
Hypothetical protein.
  
 0.671
DC74_2741
ABC-type sugar transport system, permease component.
 
    0.660
DC74_2740
Integral membrane transporter.
 
    0.659
DC74_1681
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.616
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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