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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_3869Hypothetical protein. (302 aa)    
Predicted Functional Partners:
DC74_3868
Hypothetical protein.
 
 
 0.959
DC74_3870
Hypothetical protein.
 
     0.929
DC74_3871
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.675
DC74_3207
ABC transporter integral membrane protein.
 
 
 0.638
DC74_6701
Hypothetical protein.
 
     0.575
DC74_5945
Putative ABC transporter ATP-binding protein.
 
     0.539
DC74_1295
GNAT acetyltransferase; Belongs to the AAA ATPase family.
  
   0.448
DC74_2735
Putative ABC transporter permease protein.
  
 0.434
DC74_5139
Putative ABC transporter permease protein.
  
 0.434
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.429
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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