Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
DC74_387Peptidase. (657 aa)    
Predicted Functional Partners:
DC74_388
L-lactate 2-monooxygenase.
     
 0.777
DC74_392
Surfactin synthetase.
     
 0.724
DC74_389
Hypothetical protein.
     
 0.723
DC74_390
Amino acid adenylation domain-containing protein.
       0.718
DC74_391
Major facilitator superfamily protein.
       0.718
DC74_393
3-oxoacyl-(acyl-carrier-protein) synthase III.
       0.718
DC74_386
Hypothetical protein.
 
     0.651
DC74_395
Linear pentadecapeptide gramicidin synthetase LgrB.
     
 0.544
DC74_394
3-oxoacyl-(acyl-carrier-protein) synthase III.
       0.534
DC74_396
Amino acid adenylation domain-containing protein.
       0.534
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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