Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DC74_399Coenzyme F420-reducing hydrogenase, beta subunit. (405 aa)    
Predicted Functional Partners:
DC74_6554
Hypothetical protein.
 
 
 0.929
DC74_393
3-oxoacyl-(acyl-carrier-protein) synthase III.
 
     0.852
DC74_396
Amino acid adenylation domain-containing protein.
 
  
 0.838
DC74_7326
Cytochrome c3-like [NiFe] hydrogenase large subunit.
  
 
 0.838
DC74_400
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.831
aroA
Prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
     0.817
DC74_395
Linear pentadecapeptide gramicidin synthetase LgrB.
 
     0.815
DC74_398
Zinc-binding oxidoreductase.
  
    0.813
DC74_2472
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.808
DC74_2522
Hypothetical protein.
  
 
 0.808
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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