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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB_2Thioredoxin reductase (NADPH). (324 aa)    
Predicted Functional Partners:
trxA_3
Thioredoxin; Belongs to the thioredoxin family.
 
 0.997
DC74_7665
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
  
0.923
DC74_983
Hypothetical protein.
 
  
0.915
cysA
Cystathionine gamma-lyase.
  
 
 0.910
csd_1
Aminotransferase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.907
DC74_6343
SufS subfamily cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.907
DC74_7505
Cysteine desulfurase.
  
 
 0.907
DC74_1294
Dehydrogenase.
    
  0.901
trxA_4
Thioredoxin; Belongs to the thioredoxin family.
 
 0.870
DC74_5195
Alkyl hydroperoxide reductase.
  
 
 0.854
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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