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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_4240Hypothetical protein. (291 aa)    
Predicted Functional Partners:
DC74_721
Hypothetical protein.
  
     0.769
DC74_1516
Hypothetical protein.
  
     0.758
DC74_5019
Hypothetical protein.
  
     0.749
DC74_4241
DNA-damage-inducible protein F.
       0.701
DC74_4656
Putative secreted transglycosylase.
  
  
 0.574
DC74_4330
Hypothetical protein.
  
     0.564
DC74_3205
Putative esterase.
  
     0.556
DC74_6190
Hypothetical protein.
 
     0.550
DC74_7163
Esterase.
  
     0.529
DC74_5753
Hypothetical protein.
  
     0.521
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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