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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_4258Hypothetical protein. (159 aa)    
Predicted Functional Partners:
DC74_4259
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.812
DC74_4263
Hypothetical protein.
 
    0.706
cysA
Cystathionine gamma-lyase.
       0.696
DC74_4261
Low molecular weight protein tyrosine phosphatase.
       0.696
DC74_4262
Hypothetical protein.
       0.696
DC74_2348
Hypothetical protein.
  
     0.650
DC74_4265
IclR family transcriptional regulator.
 
     0.650
DC74_4264
Hypothetical protein.
       0.630
DC74_3793
Hypothetical protein.
  
     0.628
DC74_2539
Putative ABC transporter permease protein.
  
     0.623
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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