Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_4286 | DC74_4287 | MerR family transcriptional regulator. | Hypothetical protein. | 0.858 |
DC74_4286 | DC74_4288 | MerR family transcriptional regulator. | Short chain dehydrogenase. | 0.851 |
DC74_4286 | DC74_4289 | MerR family transcriptional regulator. | Hypothetical protein. | 0.846 |
DC74_4287 | DC74_4286 | Hypothetical protein. | MerR family transcriptional regulator. | 0.858 |
DC74_4287 | DC74_4288 | Hypothetical protein. | Short chain dehydrogenase. | 0.877 |
DC74_4287 | DC74_4289 | Hypothetical protein. | Hypothetical protein. | 0.808 |
DC74_4288 | DC74_4286 | Short chain dehydrogenase. | MerR family transcriptional regulator. | 0.851 |
DC74_4288 | DC74_4287 | Short chain dehydrogenase. | Hypothetical protein. | 0.877 |
DC74_4288 | DC74_4289 | Short chain dehydrogenase. | Hypothetical protein. | 0.931 |
DC74_4288 | DC74_5502 | Short chain dehydrogenase. | Polyketide synthase of type I. | 0.860 |
DC74_4288 | DC74_5503 | Short chain dehydrogenase. | DfnF. | 0.860 |
DC74_4288 | DC74_5504 | Short chain dehydrogenase. | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.860 |
DC74_4288 | DC74_8194 | Short chain dehydrogenase. | Putative type I polyketide synthase WcbR. | 0.782 |
DC74_4288 | DC74_939 | Short chain dehydrogenase. | Putative type I polyketide synthase WcbR. | 0.782 |
DC74_4288 | DC74_942 | Short chain dehydrogenase. | Beta-ketoacyl synthase family protein. | 0.810 |
DC74_4288 | DC74_963 | Short chain dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.828 |
DC74_4289 | DC74_4286 | Hypothetical protein. | MerR family transcriptional regulator. | 0.846 |
DC74_4289 | DC74_4287 | Hypothetical protein. | Hypothetical protein. | 0.808 |
DC74_4289 | DC74_4288 | Hypothetical protein. | Short chain dehydrogenase. | 0.931 |
DC74_5502 | DC74_4288 | Polyketide synthase of type I. | Short chain dehydrogenase. | 0.860 |
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