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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_4344acyl-CoA dehydrogenase. (355 aa)    
Predicted Functional Partners:
DC74_4342
acyl-CoA dehydrogenase.
     0.956
DC74_4345
Hypothetical protein.
 
 0.955
DC74_4343
Hypothetical protein.
 
    0.940
ltp2_2
Lipid-transfer protein.
 
 
 0.920
fadE26_2
acyl-CoA dehydrogenase.
     0.814
DC74_1827
Electron transfer flavoprotein, alpha subunit.
 
 
 0.775
DC74_7424
acyl-CoA dehydrogenase.
  
     0.769
DC74_4347
ECF subfamily RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.753
DC74_7425
acyl-CoA dehydrogenase.
 
     0.750
DC74_4341
Hypothetical protein.
       0.746
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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