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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_4441Lysine biosynthesis enzyme LysX. (318 aa)    
Predicted Functional Partners:
DC74_4442
alpha-L-glutamate ligase, RimK family.
 
    
0.853
DC74_1330
Ribosomal protein S6 modification-like protein B-like; Belongs to the RimK family.
  
     0.707
DC74_132
Hypothetical protein.
  
   
 0.600
DC74_6660
LuxR family transcriptional regulator.
  
     0.578
DC74_512
GH3 auxin-responsive promoter.
 
     0.502
DC74_525
Peptidase S1 and S6 chymotrypsin/Hap.
  
     0.496
DC74_826
Hypothetical protein.
  
     0.474
DC74_6879
Hypothetical protein.
 
   
 0.464
DC74_4443
Putative germacradienol synthase.
       0.463
DC74_133
Beta-lactamase.
  
   
 0.461
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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