Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_3665 | DC74_3666 | Putative fructose-specific permease. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.999 |
DC74_3665 | DC74_3761 | Putative fructose-specific permease. | Glycerol-3-phosphate dehydrogenase. | 0.530 |
DC74_3665 | DC74_4525 | Putative fructose-specific permease. | DeoR family transcriptional regulator. | 0.824 |
DC74_3665 | DC74_4773 | Putative fructose-specific permease. | Sugar kinase; Belongs to the carbohydrate kinase PfkB family. | 0.997 |
DC74_3665 | DC74_6901 | Putative fructose-specific permease. | Putative erythritol kinase protein; Belongs to the FGGY kinase family. | 0.577 |
DC74_3665 | DC74_6902 | Putative fructose-specific permease. | Pentulose/hexulose kinase. | 0.577 |
DC74_3666 | DC74_3665 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | Putative fructose-specific permease. | 0.999 |
DC74_3666 | DC74_4525 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | DeoR family transcriptional regulator. | 0.693 |
DC74_3761 | DC74_3665 | Glycerol-3-phosphate dehydrogenase. | Putative fructose-specific permease. | 0.530 |
DC74_3761 | DC74_4525 | Glycerol-3-phosphate dehydrogenase. | DeoR family transcriptional regulator. | 0.427 |
DC74_4524 | DC74_4525 | Endoribonuclease L-PSP. | DeoR family transcriptional regulator. | 0.778 |
DC74_4524 | DC74_4526 | Endoribonuclease L-PSP. | Hypothetical protein. | 0.570 |
DC74_4525 | DC74_3665 | DeoR family transcriptional regulator. | Putative fructose-specific permease. | 0.824 |
DC74_4525 | DC74_3666 | DeoR family transcriptional regulator. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.693 |
DC74_4525 | DC74_3761 | DeoR family transcriptional regulator. | Glycerol-3-phosphate dehydrogenase. | 0.427 |
DC74_4525 | DC74_4524 | DeoR family transcriptional regulator. | Endoribonuclease L-PSP. | 0.778 |
DC74_4525 | DC74_4526 | DeoR family transcriptional regulator. | Hypothetical protein. | 0.559 |
DC74_4525 | DC74_4773 | DeoR family transcriptional regulator. | Sugar kinase; Belongs to the carbohydrate kinase PfkB family. | 0.693 |
DC74_4525 | DC74_6901 | DeoR family transcriptional regulator. | Putative erythritol kinase protein; Belongs to the FGGY kinase family. | 0.491 |
DC74_4525 | DC74_6902 | DeoR family transcriptional regulator. | Pentulose/hexulose kinase. | 0.460 |
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