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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_4749Phage integrase; Belongs to the 'phage' integrase family. (349 aa)    
Predicted Functional Partners:
DC74_644
Phage integrase.
  
     0.591
DC74_5239
Integrase; Belongs to the 'phage' integrase family.
  
     0.585
DC74_3492
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.577
DC74_6042
Phage integrase.
  
     0.546
DC74_5229
Integrase; Belongs to the 'phage' integrase family.
  
     0.535
DC74_6288
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.509
whiA
Sporulation regulatory protein; Involved in cell division and chromosome segregation.
  
    0.481
DC74_4757
Hypothetical protein.
  
     0.465
DC74_4748
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.447
DC74_3442
Hypothetical protein.
  
    0.433
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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