Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_4762 | DC74_4763 | Putative dehydrogenase. | Hypothetical protein. | 0.552 |
DC74_4762 | DC74_4764 | Putative dehydrogenase. | Hypothetical protein. | 0.557 |
DC74_4762 | DC74_5425 | Putative dehydrogenase. | Dehydrogenase. | 0.695 |
DC74_4762 | DC74_5502 | Putative dehydrogenase. | Polyketide synthase of type I. | 0.421 |
DC74_4762 | DC74_5503 | Putative dehydrogenase. | DfnF. | 0.421 |
DC74_4762 | DC74_5504 | Putative dehydrogenase. | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.421 |
DC74_4762 | DC74_5980 | Putative dehydrogenase. | Putative dehydrogenase. | 0.658 |
DC74_4762 | DC74_7045 | Putative dehydrogenase. | Hydroxyurea phosphotransferase. | 0.557 |
DC74_4762 | DC74_963 | Putative dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.451 |
DC74_4762 | DC74_979 | Putative dehydrogenase. | Zinc-binding alcohol dehydrogenase family protein. | 0.766 |
DC74_4763 | DC74_4762 | Hypothetical protein. | Putative dehydrogenase. | 0.552 |
DC74_4764 | DC74_4762 | Hypothetical protein. | Putative dehydrogenase. | 0.557 |
DC74_5425 | DC74_4762 | Dehydrogenase. | Putative dehydrogenase. | 0.695 |
DC74_5425 | DC74_5502 | Dehydrogenase. | Polyketide synthase of type I. | 0.421 |
DC74_5425 | DC74_5503 | Dehydrogenase. | DfnF. | 0.421 |
DC74_5425 | DC74_5504 | Dehydrogenase. | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.421 |
DC74_5425 | DC74_963 | Dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.451 |
DC74_5502 | DC74_4762 | Polyketide synthase of type I. | Putative dehydrogenase. | 0.421 |
DC74_5502 | DC74_5425 | Polyketide synthase of type I. | Dehydrogenase. | 0.421 |
DC74_5502 | DC74_5503 | Polyketide synthase of type I. | DfnF. | 0.999 |
page 1 of 3