STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_4813-carboxy-cis,cis-muconate cycloisomerase. (469 aa)    
Predicted Functional Partners:
DC74_482
Protocatechuate 3,4-dioxygenase alpha subunit.
 
 
 0.998
DC74_483
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.997
DC74_6310
Protocatechuate 3,4-dioxygenase alpha subunit.
 
 
 0.992
DC74_6309
Protocatechuate 3,4-dioxygenase subunit beta.
 
 
 0.988
DC74_6435
3-oxoadipate enol-lactone hydrolase.
 
 
 0.980
DC74_6311
3-oxoadipate enol-lactone hydrolase.
 
 
 0.975
DC74_880
Carboxymuconolactone decarboxylase family protein.
 
 
 0.943
DC74_484
3-oxoacid CoA-transferase subunit B.
 
  
 0.906
DC74_485
3-oxoacid CoA-transferase subunit A.
 
  
 0.897
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
  
 0.837
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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