Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1840 | DC74_2228 | ABC transporter ATP-binding protein - glutamine transport. | Putative ABC transporter substrate-binding protein. | 0.653 |
DC74_1840 | DC74_2234 | ABC transporter ATP-binding protein - glutamine transport. | Putative ABC transporter substrate-binding protein. | 0.798 |
DC74_1840 | DC74_5422 | ABC transporter ATP-binding protein - glutamine transport. | Binding-protein-dependent transporter. | 0.905 |
DC74_1840 | DC74_5423 | ABC transporter ATP-binding protein - glutamine transport. | Arginine/ornithine binding protein. | 0.831 |
DC74_1840 | DC74_6917 | ABC transporter ATP-binding protein - glutamine transport. | Periplasmic component of amino acid ABC-type transporter/signal transduction system; Belongs to the bacterial solute-binding protein 3 family. | 0.847 |
DC74_2228 | DC74_1840 | Putative ABC transporter substrate-binding protein. | ABC transporter ATP-binding protein - glutamine transport. | 0.653 |
DC74_2228 | DC74_2229 | Putative ABC transporter substrate-binding protein. | Putative ABC transporter ATP-binding protein. | 0.962 |
DC74_2228 | DC74_2234 | Putative ABC transporter substrate-binding protein. | Putative ABC transporter substrate-binding protein. | 0.657 |
DC74_2228 | DC74_3295 | Putative ABC transporter substrate-binding protein. | Amino acid ABC transporter ATP-binding protein. | 0.596 |
DC74_2228 | DC74_5421 | Putative ABC transporter substrate-binding protein. | Arginine/ornithine transport ATP-binding protein. | 0.807 |
DC74_2228 | DC74_5422 | Putative ABC transporter substrate-binding protein. | Binding-protein-dependent transporter. | 0.853 |
DC74_2228 | DC74_5867 | Putative ABC transporter substrate-binding protein. | Glutamate uptake system ATP-binding protein. | 0.697 |
DC74_2228 | DC74_6915 | Putative ABC transporter substrate-binding protein. | ABC transporter ATP-binding protein. | 0.698 |
DC74_2229 | DC74_2228 | Putative ABC transporter ATP-binding protein. | Putative ABC transporter substrate-binding protein. | 0.962 |
DC74_2229 | DC74_2234 | Putative ABC transporter ATP-binding protein. | Putative ABC transporter substrate-binding protein. | 0.925 |
DC74_2229 | DC74_5422 | Putative ABC transporter ATP-binding protein. | Binding-protein-dependent transporter. | 0.920 |
DC74_2229 | DC74_5423 | Putative ABC transporter ATP-binding protein. | Arginine/ornithine binding protein. | 0.855 |
DC74_2229 | DC74_6917 | Putative ABC transporter ATP-binding protein. | Periplasmic component of amino acid ABC-type transporter/signal transduction system; Belongs to the bacterial solute-binding protein 3 family. | 0.837 |
DC74_2234 | DC74_1840 | Putative ABC transporter substrate-binding protein. | ABC transporter ATP-binding protein - glutamine transport. | 0.798 |
DC74_2234 | DC74_2228 | Putative ABC transporter substrate-binding protein. | Putative ABC transporter substrate-binding protein. | 0.657 |
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