Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_2847 | DC74_2853 | Hypothetical protein. | ATP/GTP-binding protein. | 0.595 |
DC74_2847 | DC74_5536 | Hypothetical protein. | Hypothetical protein. | 0.762 |
DC74_2847 | DC74_5537 | Hypothetical protein. | Hypothetical protein. | 0.698 |
DC74_2847 | DC74_5538 | Hypothetical protein. | Hypothetical protein. | 0.617 |
DC74_2853 | DC74_2847 | ATP/GTP-binding protein. | Hypothetical protein. | 0.595 |
DC74_2853 | DC74_5536 | ATP/GTP-binding protein. | Hypothetical protein. | 0.712 |
DC74_2853 | DC74_5537 | ATP/GTP-binding protein. | Hypothetical protein. | 0.618 |
DC74_2853 | DC74_5538 | ATP/GTP-binding protein. | Hypothetical protein. | 0.578 |
DC74_5535 | DC74_5536 | Transcriptional regulator. | Hypothetical protein. | 0.767 |
DC74_5535 | DC74_5537 | Transcriptional regulator. | Hypothetical protein. | 0.767 |
DC74_5535 | DC74_5538 | Transcriptional regulator. | Hypothetical protein. | 0.767 |
DC74_5535 | DC74_5539 | Transcriptional regulator. | Hypothetical protein. | 0.712 |
DC74_5535 | DC74_5540 | Transcriptional regulator. | Hypothetical protein. | 0.712 |
DC74_5535 | DC74_5543 | Transcriptional regulator. | MarR family transcriptional regulator. | 0.723 |
DC74_5535 | DC74_5544 | Transcriptional regulator. | Hypothetical protein. | 0.628 |
DC74_5535 | DC74_8159 | Transcriptional regulator. | Transcriptional regulator, TetR family. | 0.414 |
DC74_5536 | DC74_2847 | Hypothetical protein. | Hypothetical protein. | 0.762 |
DC74_5536 | DC74_2853 | Hypothetical protein. | ATP/GTP-binding protein. | 0.712 |
DC74_5536 | DC74_5535 | Hypothetical protein. | Transcriptional regulator. | 0.767 |
DC74_5536 | DC74_5537 | Hypothetical protein. | Hypothetical protein. | 0.970 |
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