Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1827 | DC74_1828 | Electron transfer flavoprotein, alpha subunit. | Electron transfer flavoprotein, beta subunit. | 0.999 |
DC74_1827 | DC74_5977 | Electron transfer flavoprotein, alpha subunit. | salicylyl-CoA 5-hydroxylase. | 0.656 |
DC74_1827 | DC74_8194 | Electron transfer flavoprotein, alpha subunit. | Putative type I polyketide synthase WcbR. | 0.539 |
DC74_1827 | DC74_939 | Electron transfer flavoprotein, alpha subunit. | Putative type I polyketide synthase WcbR. | 0.539 |
DC74_1827 | DC74_963 | Electron transfer flavoprotein, alpha subunit. | Amino acid adenylation domain-containing protein. | 0.553 |
DC74_1828 | DC74_1827 | Electron transfer flavoprotein, beta subunit. | Electron transfer flavoprotein, alpha subunit. | 0.999 |
DC74_1828 | DC74_5977 | Electron transfer flavoprotein, beta subunit. | salicylyl-CoA 5-hydroxylase. | 0.616 |
DC74_1828 | DC74_8194 | Electron transfer flavoprotein, beta subunit. | Putative type I polyketide synthase WcbR. | 0.472 |
DC74_1828 | DC74_939 | Electron transfer flavoprotein, beta subunit. | Putative type I polyketide synthase WcbR. | 0.472 |
DC74_1828 | DC74_963 | Electron transfer flavoprotein, beta subunit. | Amino acid adenylation domain-containing protein. | 0.486 |
DC74_4524 | DC74_5977 | Endoribonuclease L-PSP. | salicylyl-CoA 5-hydroxylase. | 0.652 |
DC74_4524 | DC74_5983 | Endoribonuclease L-PSP. | Hypothetical protein. | 0.699 |
DC74_4524 | DC74_5984 | Endoribonuclease L-PSP. | Fatty acid:CoA ligase. | 0.781 |
DC74_5975 | DC74_5977 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | salicylyl-CoA 5-hydroxylase. | 0.703 |
DC74_5975 | DC74_5984 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid:CoA ligase. | 0.448 |
DC74_5975 | DC74_8194 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative type I polyketide synthase WcbR. | 0.477 |
DC74_5975 | DC74_825 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 4-hydroxybenzoyl-CoA thioesterase protein. | 0.428 |
DC74_5975 | DC74_939 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative type I polyketide synthase WcbR. | 0.477 |
DC74_5975 | DC74_963 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Amino acid adenylation domain-containing protein. | 0.631 |
DC74_5977 | DC74_1827 | salicylyl-CoA 5-hydroxylase. | Electron transfer flavoprotein, alpha subunit. | 0.656 |
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