Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1839 | DC74_2230 | Glutamine ABC transporter permease protein. | Putative ABC transporter permease protein. | 0.556 |
DC74_1839 | DC74_2232 | Glutamine ABC transporter permease protein. | ABC transporter permease. | 0.514 |
DC74_1839 | DC74_3293 | Glutamine ABC transporter permease protein. | Amino acid ABC transporter permease protein. | 0.523 |
DC74_1839 | DC74_3294 | Glutamine ABC transporter permease protein. | Amino acid ABC transporter integral membrane protein. | 0.534 |
DC74_1839 | DC74_5422 | Glutamine ABC transporter permease protein. | Binding-protein-dependent transporter. | 0.559 |
DC74_1839 | DC74_5864 | Glutamine ABC transporter permease protein. | Glutamate transporter permease. | 0.539 |
DC74_1839 | DC74_5865 | Glutamine ABC transporter permease protein. | Glutamate transporter permease. | 0.488 |
DC74_1839 | DC74_6915 | Glutamine ABC transporter permease protein. | ABC transporter ATP-binding protein. | 0.899 |
DC74_1839 | DC74_6916 | Glutamine ABC transporter permease protein. | Amino acid ABC transporter membrane protein. | 0.486 |
DC74_1839 | DC74_6917 | Glutamine ABC transporter permease protein. | Periplasmic component of amino acid ABC-type transporter/signal transduction system; Belongs to the bacterial solute-binding protein 3 family. | 0.893 |
DC74_2230 | DC74_1839 | Putative ABC transporter permease protein. | Glutamine ABC transporter permease protein. | 0.556 |
DC74_2230 | DC74_2232 | Putative ABC transporter permease protein. | ABC transporter permease. | 0.980 |
DC74_2230 | DC74_3293 | Putative ABC transporter permease protein. | Amino acid ABC transporter permease protein. | 0.534 |
DC74_2230 | DC74_3294 | Putative ABC transporter permease protein. | Amino acid ABC transporter integral membrane protein. | 0.544 |
DC74_2230 | DC74_5422 | Putative ABC transporter permease protein. | Binding-protein-dependent transporter. | 0.429 |
DC74_2230 | DC74_5864 | Putative ABC transporter permease protein. | Glutamate transporter permease. | 0.566 |
DC74_2230 | DC74_5865 | Putative ABC transporter permease protein. | Glutamate transporter permease. | 0.524 |
DC74_2230 | DC74_6915 | Putative ABC transporter permease protein. | ABC transporter ATP-binding protein. | 0.914 |
DC74_2230 | DC74_6916 | Putative ABC transporter permease protein. | Amino acid ABC transporter membrane protein. | 0.543 |
DC74_2230 | DC74_6917 | Putative ABC transporter permease protein. | Periplasmic component of amino acid ABC-type transporter/signal transduction system; Belongs to the bacterial solute-binding protein 3 family. | 0.911 |
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