Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1723 | DC74_4345 | Hypothetical protein. | Hypothetical protein. | 0.861 |
DC74_1723 | DC74_7103 | Hypothetical protein. | Hypothetical protein. | 0.538 |
DC74_1723 | DC74_7104 | Hypothetical protein. | Aminoglycoside phosphotransferase-like protein. | 0.519 |
DC74_2172 | DC74_7103 | Putative phosphotransferase. | Hypothetical protein. | 0.659 |
DC74_2329 | DC74_2330 | Amidohydrolase. | Amidohydrolase. | 0.897 |
DC74_2329 | DC74_3709 | Amidohydrolase. | Putative D-aminoacylase. | 0.478 |
DC74_2329 | DC74_7103 | Amidohydrolase. | Hypothetical protein. | 0.608 |
DC74_2329 | DC74_7104 | Amidohydrolase. | Aminoglycoside phosphotransferase-like protein. | 0.450 |
DC74_2330 | DC74_2329 | Amidohydrolase. | Amidohydrolase. | 0.897 |
DC74_2330 | DC74_3709 | Amidohydrolase. | Putative D-aminoacylase. | 0.428 |
DC74_2330 | DC74_7103 | Amidohydrolase. | Hypothetical protein. | 0.585 |
DC74_3709 | DC74_2329 | Putative D-aminoacylase. | Amidohydrolase. | 0.478 |
DC74_3709 | DC74_2330 | Putative D-aminoacylase. | Amidohydrolase. | 0.428 |
DC74_3709 | DC74_4872 | Putative D-aminoacylase. | Lipoprotein. | 0.503 |
DC74_3709 | DC74_7103 | Putative D-aminoacylase. | Hypothetical protein. | 0.615 |
DC74_4313 | DC74_4872 | Putative integral membrane protein. | Lipoprotein. | 0.659 |
DC74_4313 | DC74_7103 | Putative integral membrane protein. | Hypothetical protein. | 0.569 |
DC74_4345 | DC74_1723 | Hypothetical protein. | Hypothetical protein. | 0.861 |
DC74_4345 | DC74_7103 | Hypothetical protein. | Hypothetical protein. | 0.533 |
DC74_4345 | DC74_7104 | Hypothetical protein. | Aminoglycoside phosphotransferase-like protein. | 0.609 |
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