Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1923 | DC74_2658 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | Beta-lactamase domain-containing protein. | 0.527 |
DC74_1923 | DC74_3428 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | LmbE family protein. | 0.406 |
DC74_1923 | DC74_4779 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | Hypothetical protein. | 0.451 |
DC74_1923 | DC74_7870 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | TetR family transcriptional regulator. | 0.451 |
DC74_2658 | DC74_1923 | Beta-lactamase domain-containing protein. | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | 0.527 |
DC74_2658 | DC74_29 | Beta-lactamase domain-containing protein. | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | 0.589 |
DC74_2658 | DC74_4779 | Beta-lactamase domain-containing protein. | Hypothetical protein. | 0.550 |
DC74_2658 | DC74_7870 | Beta-lactamase domain-containing protein. | TetR family transcriptional regulator. | 0.495 |
DC74_29 | DC74_2658 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | Beta-lactamase domain-containing protein. | 0.589 |
DC74_29 | DC74_3428 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | LmbE family protein. | 0.453 |
DC74_29 | DC74_4779 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | Hypothetical protein. | 0.497 |
DC74_29 | DC74_7870 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | TetR family transcriptional regulator. | 0.510 |
DC74_29 | DC74_7900 | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | 0.408 |
DC74_3428 | DC74_1923 | LmbE family protein. | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | 0.406 |
DC74_3428 | DC74_29 | LmbE family protein. | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | 0.453 |
DC74_3428 | DC74_4779 | LmbE family protein. | Hypothetical protein. | 0.676 |
DC74_3428 | DC74_7870 | LmbE family protein. | TetR family transcriptional regulator. | 0.508 |
DC74_3428 | DC74_7953 | LmbE family protein. | Methyltransferase. | 0.600 |
DC74_4779 | DC74_1923 | Hypothetical protein. | rhs/YD repeat-containing protein; Belongs to the WXG100 family. | 0.451 |
DC74_4779 | DC74_2658 | Hypothetical protein. | Beta-lactamase domain-containing protein. | 0.550 |
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