STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_7870TetR family transcriptional regulator. (193 aa)    
Predicted Functional Partners:
DC74_7871
TetR family transcriptional regulator.
 
    
0.557
DC74_7869
Serine-threonine protein kinase.
       0.518
DC74_29
rhs/YD repeat-containing protein; Belongs to the WXG100 family.
  
     0.510
DC74_3428
LmbE family protein.
  
     0.508
DC74_2658
Beta-lactamase domain-containing protein.
  
     0.495
DC74_4779
Hypothetical protein.
  
     0.470
DC74_1923
rhs/YD repeat-containing protein; Belongs to the WXG100 family.
  
     0.451
DC74_7929
LuxR family transcriptional regulator.
  
     0.423
DC74_7953
Methyltransferase.
  
     0.422
DC74_7900
NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family.
  
    0.421
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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