Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_1242 | DC74_7946 | Hypothetical protein. | Hypothetical protein. | 0.582 |
DC74_1242 | DC74_942 | Hypothetical protein. | Beta-ketoacyl synthase family protein. | 0.428 |
DC74_2857 | DC74_7946 | Hypothetical protein. | Hypothetical protein. | 0.501 |
DC74_3709 | DC74_6315 | Putative D-aminoacylase. | Carboxylesterase. | 0.427 |
DC74_3709 | DC74_7946 | Putative D-aminoacylase. | Hypothetical protein. | 0.484 |
DC74_5502 | DC74_5503 | Polyketide synthase of type I. | DfnF. | 0.999 |
DC74_5502 | DC74_5504 | Polyketide synthase of type I. | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
DC74_5502 | DC74_6638 | Polyketide synthase of type I. | Flavin binding monooxygenase. | 0.588 |
DC74_5502 | DC74_7946 | Polyketide synthase of type I. | Hypothetical protein. | 0.510 |
DC74_5502 | DC74_942 | Polyketide synthase of type I. | Beta-ketoacyl synthase family protein. | 0.999 |
DC74_5502 | DC74_963 | Polyketide synthase of type I. | Amino acid adenylation domain-containing protein. | 0.999 |
DC74_5503 | DC74_5502 | DfnF. | Polyketide synthase of type I. | 0.999 |
DC74_5503 | DC74_5504 | DfnF. | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
DC74_5503 | DC74_6638 | DfnF. | Flavin binding monooxygenase. | 0.588 |
DC74_5503 | DC74_7946 | DfnF. | Hypothetical protein. | 0.510 |
DC74_5503 | DC74_942 | DfnF. | Beta-ketoacyl synthase family protein. | 0.999 |
DC74_5503 | DC74_963 | DfnF. | Amino acid adenylation domain-containing protein. | 0.999 |
DC74_5504 | DC74_5502 | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Polyketide synthase of type I. | 0.999 |
DC74_5504 | DC74_5503 | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | DfnF. | 0.999 |
DC74_5504 | DC74_6638 | DfnE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Flavin binding monooxygenase. | 0.588 |
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