STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC74_7951Nucleotide-binding protein. (480 aa)    
Predicted Functional Partners:
DC74_7952
Hypothetical protein.
 
   
 0.916
DC74_7953
Methyltransferase.
 
   
 0.863
DC74_8150
WD repeat-containing protein.
   
 0.815
DC74_4443
Putative germacradienol synthase.
 
   
 0.792
DC74_5832
Two-component system sensor kinase.
   
 
 0.779
DC74_7485
Alcohol dehydrogenase GroES-like.
  
  
 0.575
DC74_5116
Adenylate cyclase.
  
 0.567
DC74_4351
Two-component system sensor kinase.
   
 
 0.552
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.544
DC74_6843
Hypothetical protein.
   
 
 0.540
Your Current Organism:
Streptomyces albulus
NCBI taxonomy Id: 68570
Other names: ATCC 12757, BCRC 11819, CBS 711.72, CCRC 11819, CCRC:11819, DSM 40492, IFO 13410, ISP 5492, JCM 4718, KCTC 9668, NBRC 13410, NRRL B-5386, NRRL-ISP 5492, S. albulus, strain IMC S-0802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.