Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DC74_2755 | DC74_7989 | Beta-lactamase. | Beta-lactamase. | 0.671 |
DC74_3760 | DC74_7989 | Alkaline D-peptidase. | Beta-lactamase. | 0.563 |
DC74_6822 | DC74_7989 | Peptidase. | Beta-lactamase. | 0.531 |
DC74_7988 | DC74_7989 | O-methyltransferase family 2. | Beta-lactamase. | 0.605 |
DC74_7988 | DC74_7990 | O-methyltransferase family 2. | Sam dependent methyltransferase. | 0.608 |
DC74_7988 | DC74_7991 | O-methyltransferase family 2. | Oxidoreductase. | 0.607 |
DC74_7988 | DC74_7992 | O-methyltransferase family 2. | Radical SAM domain-containing protein. | 0.615 |
DC74_7988 | DC74_7993 | O-methyltransferase family 2. | Hypothetical protein. | 0.589 |
DC74_7988 | DC74_7994 | O-methyltransferase family 2. | Hypothetical protein. | 0.587 |
DC74_7989 | DC74_2755 | Beta-lactamase. | Beta-lactamase. | 0.671 |
DC74_7989 | DC74_3760 | Beta-lactamase. | Alkaline D-peptidase. | 0.563 |
DC74_7989 | DC74_6822 | Beta-lactamase. | Peptidase. | 0.531 |
DC74_7989 | DC74_7988 | Beta-lactamase. | O-methyltransferase family 2. | 0.605 |
DC74_7989 | DC74_7990 | Beta-lactamase. | Sam dependent methyltransferase. | 0.832 |
DC74_7989 | DC74_7991 | Beta-lactamase. | Oxidoreductase. | 0.856 |
DC74_7989 | DC74_7992 | Beta-lactamase. | Radical SAM domain-containing protein. | 0.827 |
DC74_7989 | DC74_7993 | Beta-lactamase. | Hypothetical protein. | 0.808 |
DC74_7989 | DC74_7994 | Beta-lactamase. | Hypothetical protein. | 0.788 |
DC74_7989 | DC74_814 | Beta-lactamase. | Beta-lactamase class C-like protein. | 0.519 |
DC74_7990 | DC74_7988 | Sam dependent methyltransferase. | O-methyltransferase family 2. | 0.608 |
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