STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383095_00938Unannotated protein. (309 aa)    
Predicted Functional Partners:
GCA_000383095_02078
Unannotated protein.
    
  0.879
GCA_000383095_01225
Unannotated protein.
    
  0.868
GCA_000383095_02592
Unannotated protein.
 
 
 0.828
GCA_000383095_02588
Unannotated protein.
  
 
 0.794
GCA_000383095_01794
Unannotated protein.
 
     0.693
GCA_000383095_01768
Unannotated protein.
    
 0.651
GCA_000383095_02875
Unannotated protein.
 
 
  0.639
GCA_000383095_01309
Unannotated protein.
  
 
  0.635
GCA_000383095_01929
Unannotated protein.
  
 
  0.635
GCA_000383095_03621
Unannotated protein.
  
 
  0.635
Your Current Organism:
Sphingomonas sp. PR090111T3T6A
NCBI taxonomy Id: 685778
Other names: S. sp. PR090111-T3T-6A, Sphingomonas sp. PR090111-T3T-6A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.